Forschungsseminar Künstliche Intelligenz (FSKI)

Mon, 01 Jan 0001 00:00:00 +0000

The research seminar is the weekly meeting at which members of the group present their ongoing work. It is an in-person seminar, held every Friday of the lecture period except on public holidays, 11:00–12:30, in the large seminar room (“Transformer”) at IKIM; every semester opens with the topic selection. Jan Egger and colleagues convene it. Students enrol through the UDE course catalogue (LSF), where the seminar is listed as Forschungsseminar Kuenstliche Intelligenz.

The session lists run newest semester first.

Summer semester 2026

Course catalogue entry (LSF)

17 Apr 2026 — topic selection
24 Apr 2026 — Kevin Kopp: The Effect of Antibiotic Escalation in Critically-Ill Hematologic and Oncologic Patients: A Target Trial Emulation Using Electronic Health Records Data
1 May 2026 — 1. Mai (public holiday)
8 May 2026 — Tim Lenfers: “Retiring the Highlighter:” Automating Feature Extraction with LLMs
15 May 2026 — Hamza Kalisch: Region-Normalized DPO for Medical Image Segmentation
22 May 2026 — Jana Fragemann: Towards automated pulmonary embolism detection
29 May 2026 — Marius Schlegel: From Simulation to Reality: Autonomous Ultrasound-Guided Interventions
5 Jun 2026 — Muhammad Rehman: PET-Guided CT Lesion Segmentation for Prostate Cancer
12 Jun 2026 — Gijs Luijten: Gaussian Splats and a bit of 3D scanning
19 Jun 2026 — Hannah Timm: Vessel branching patterns quantified by artificial intelligence as a novel prognostic biomarker in advanced renal cell carcinoma
26 Jun 2026 — Matthias Hoffjan: IKIM’s AI Agent
3 Jul 2026 — Sameh Khattab: Rethinking LLM Adaptation for Biomedical Retrievers via Synthetic Data and Model Merging; Osman Koras: Configurable Clinical Information Extraction
10 Jul 2026 — Dennis Hermelyn: Neural Operator-Based Prediction of Proton Pencil Beam Dose Distributions
17 Jul 2026 — Niklas Schwarz: SVRMamba: Rigid Slice-to-Volume Registration using Efficient Mamba Fusion
24 Jul 2026 — Ana Sofia Santos: Digital Humans for Effective Medical Education: Can AI Virtual Patients Help Train Better Doctors?

Winter semester 2025/26

Course catalogue entry (LSF)

17 Oct 2025 — topic selection
24 Oct 2025 — Sameh Khattab: AI Augmented Annotation
31 Oct 2025 — Benja Vahldiek: AI in Ophthalmology: Smarter OCT Analysis for Macular Diseases
7 Nov 2025 — cancelled
14 Nov 2025 — Kevin Kopp: Causal Inferences Antibiotics
21 Nov 2025 — Tim Lenfers: DVC: Building a reproducible data registry
28 Nov 2025 — Ana Sofia Santos: Digital Human
5 Dec 2025 — Lisle Faray de Paiva: Medical Imaging 3D Reconstruction
12 Dec 2025 — Frederic Jonske: ASaRG
19 Dec 2025 — Muhammad Rehman: Foundation Models for Few-Shot Microscopy Image Cell Segmentation
26 Dec 2025 — Weihnachtsferien (Christmas break)
2 Jan 2026 — Weihnachtsferien (Christmas break)
9 Jan 2026 — Helmut Becker: WSI-FeatureMetrics: Analyzing Spatial Relationships in NSCLC
16 Jan 2026 — Dennis Hermelyn: Neural Operator-Based Prediction of Proton Beam Dose Distributions
23 Jan 2026 — cancelled
30 Jan 2026 — Moritz Rempe: MRI Raw Data Reimagined - Complex-Valued Deep Learning for Direct k-Space Processing and Applications
6 Feb 2026 — Matthias Hoffjan: Bringing AI models into clinical pathology practice

Summer semester 2025

Course catalogue entry (LSF)

11 Apr 2025 — topic selection
18 Apr 2025 — Karfreitag (public holiday)
25 Apr 2025 — Hannah Timm: Master Thesis
2 May 2025 — Roberto Scardigno: Kidney segmentation and automatic volumetric measurements
9 May 2025 — Gijs Luijten: HITNS & AVP Paper
16 May 2025 — Hamza Kalisch: CT report generation; Tim Lenfers: cohortSHIPyard
23 May 2025 — Lisle Faray de Paiva: Segmentation in XR
30 May 2025 — Amin Dada: Patient-Oriented Question-Answer Generation from Discharge Letters
6 Jun 2025 — Moritz Rempe: PhaseGen
13 Jun 2025 — Negar Shahamiri: Incidental Breast Lesion Segmentation in CT Imaging and Clinical Deployment
20 Jun 2025 — Helmut Becker: Survival Time Prediction in NSCLC using WSI Features
27 Jun 2025 — Frederic Jonske: postponed
4 Jul 2025 — Alexander Brehmer: On Effective Multi-Class Skin Lesion Classification and Skin-Tone Bias Quantification
11 Jul 2025 — Jana Fragemann: Hessian Regularization
18 Jul 2025 — Sameh Khattab: postponed

Winter semester 2024/25

11 Oct 2024 — topic selection
18 Oct 2024 — Gijs Luijten: Overview of his research projects
25 Oct 2024 — Presentations of PhD research topics and outlines (Siegburg)
1 Nov 2024 — Allerheiligen (public holiday)
8 Nov 2024 — Jafar Hamad: Haptic feedback and augmented reality
15 Nov 2024 — Helmut Becker: Multimodal Medical Machine Learning
22 Nov 2024 — Alexander Brehmer: A short history of self supervised learning for image classification
29 Nov 2024 — Lukas Heine: Spacewalker
6 Dec 2024 — Moritz Rempe: Complex Valued Neural Networks
13 Dec 2024 — Fabian Hörst: CellViT++
20 Dec 2024 — Sameh Khattab: Integrating AI Pipelines in clinical practice
27 Dec 2024 — Weihnachtsferien (Christmas break)
3 Jan 2025 — Weihnachtsferien (Christmas break)
10 Jan 2025 — Amin Dada: Improving Medical Visual Instruction Tuning with Labeled Datasets
17 Jan 2025 — Negar Shahamiri: Implementation of Workflow-based Architecture for AI Applications in Clinic
24 Jan 2025 — Tim Lenfers: Code, Cells, and Cancer Analysis: The Adventures of a Data Scientist
31 Jan 2025 — Frederic Jonske: RadNet II

Summer semester 2024

12 Apr 2024 — topic selection
19 Apr 2024 — Lukas Heine: AMD & OCT
26 Apr 2024 — Fabian Hörst: Digital Pathology: An Image-Based Approach
3 May 2024 — Helmut Becker: Multimodality in Machine Learning for Melanoma Patients
10 May 2024 — Amr Abourayya: Little is Enough: Improving Privacy through Federated Semi-Supervised Learning
17 May 2024 — Moritz Rempe: Working in k-Space: chance or necessity?
24 May 2024 — Jana Fragemann: Survival Analysis for Patients with advanced Prostate Cancer
31 May 2024 — Frederic Jonske: LLaVA / MIRAGE
7 Jun 2024 — Osman Koras: postponed
14 Jun 2024 — Negar Shahamiri: AI in Medicine
21 Jun 2024 — Hamza Kalisch: AutoPET III Challenge: Automated Lesion Segmentation in Whole-Body PET/CT
28 Jun 2024 — Gijs Luijten: postponed
5 Jul 2024 — Amin Dada: A Brief History of Clinical Large Language Models
12 Jul 2024 — Sameh Khattab: Generative AI deployments in healthcare
19 Jul 2024 — Alexander Brehmer: Kiadeku - A Project journey from Data to Deployment

Teaching | IKIM MML

Forschungsseminar Künstliche Intelligenz (FSKI)

Summer semester 2026

Winter semester 2025/26

Summer semester 2025

Winter semester 2024/25

Summer semester 2024